STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUR31716.1Gas vesicle synthesis GvpLGvpF. (229 aa)    
Predicted Functional Partners:
gvpK
Protein GvpK.
  
   
 0.780
CUR34541.1
Protein GvpF/L (fragment).
  
   
 0.778
gvpK-2
Protein GvpK.
  
   
 0.776
CUR34545.1
Putative gas vesicle synthesis protein, GvpG-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
   
 0.775
CUR35115.1
Gas vesicle protein GvpG.
 
   
 0.775
CUR31715.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CUR31717.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.770
gvpFL
Protein GvpF/L.
  
   
 0.767
CUR30765.1
Gas vesicle protein GvpC (modular protein).
  
     0.763
get
ATPase GET3.
 
     0.757
Your Current Organism:
Planktothrix tepida
NCBI taxonomy Id: 671072
Other names: Oscillatoria sp. 4d.1, Oscillatoria sp. PCC 9214, P. tepida PCC 9214, Planktothrix sp. PCC 9214, Planktothrix tepida NIES-2870, Planktothrix tepida PCC 9214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.