STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUR32909.1Cyclase family protein. (233 aa)    
Predicted Functional Partners:
CUR32582.1
Acyl-CoA dehydrogenase family protein.
      0.856
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
  0.741
CUR32910.1
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.727
CUR35141.1
Cupin 2, conserved barrel domain protein.
  
    0.625
CUR30706.1
Acetamidase/Formamidase.
  
  
  0.499
CUR31361.1
Zeaxanthin epoxidase.
 
  
  0.466
CUR33129.1
Polyketide synthase type 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.461
nadE
Putative glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.460
CUR32911.1
Hydrolase, alpha/beta fold family domain protein.
    
  0.441
CUR32895.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
  0.423
Your Current Organism:
Planktothrix tepida
NCBI taxonomy Id: 671072
Other names: Oscillatoria sp. 4d.1, Oscillatoria sp. PCC 9214, P. tepida PCC 9214, Planktothrix sp. PCC 9214, Planktothrix tepida NIES-2870, Planktothrix tepida PCC 9214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.