Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUR31998.1 | cbbL | PL921440024 | PL9214510025 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | 0.879 |
| CUR31998.1 | cbbS | PL921440024 | PL9214510027 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Ribulose bisphosphate carboxylase small chain. | 0.736 |
| CUR31998.1 | ccmM | PL921440024 | PL921440006 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Carbon dioxide concentrating mechanism protein CcmM. | 0.728 |
| CUR31998.1 | rbcX | PL921440024 | PL9214510026 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | RbcX. | 0.970 |
| CUR31998.1 | rca | PL921440024 | PL9214430222 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Ribulose bisphosphate carboxylase/oxygenase activase. | 0.799 |
| cbbL | CUR31998.1 | PL9214510025 | PL921440024 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.879 |
| cbbL | cbbS | PL9214510025 | PL9214510027 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Ribulose bisphosphate carboxylase small chain. | 0.995 |
| cbbL | cbbYP | PL9214510025 | PL9214650009 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Protein CbbY, plasmid. | 0.800 |
| cbbL | ccmM | PL9214510025 | PL921440006 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Carbon dioxide concentrating mechanism protein CcmM. | 0.990 |
| cbbL | mtnB | PL9214510025 | PL9214430139 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily. | 0.774 |
| cbbL | mtnD | PL9214510025 | PL9214430137 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.826 |
| cbbL | mtnX | PL9214510025 | PL9214650328 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphatephosphatase. | 0.923 |
| cbbL | prk | PL9214510025 | PL9214290385 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Phosphoribulokinase. | 0.802 |
| cbbL | rbcX | PL9214510025 | PL9214510026 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | RbcX. | 0.931 |
| cbbL | rca | PL9214510025 | PL9214430222 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | Ribulose bisphosphate carboxylase/oxygenase activase. | 0.959 |
| cbbS | CUR31998.1 | PL9214510027 | PL921440024 | Ribulose bisphosphate carboxylase small chain. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.736 |
| cbbS | cbbL | PL9214510027 | PL9214510025 | Ribulose bisphosphate carboxylase small chain. | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | 0.995 |
| cbbS | cbbYP | PL9214510027 | PL9214650009 | Ribulose bisphosphate carboxylase small chain. | Protein CbbY, plasmid. | 0.773 |
| cbbS | ccmM | PL9214510027 | PL921440006 | Ribulose bisphosphate carboxylase small chain. | Carbon dioxide concentrating mechanism protein CcmM. | 0.966 |
| cbbS | prk | PL9214510027 | PL9214290385 | Ribulose bisphosphate carboxylase small chain. | Phosphoribulokinase. | 0.830 |
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