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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUR33710.1Transposase (fragment). (67 aa)    
Predicted Functional Partners:
CUR31172.1
Transposase (fragment).
 
      0.889
CUR32796.1
Transposase (fragment).
 
      0.681
CUR31257.1
Transposase.
 
      0.628
CUR35830.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.608
chlM
Magnesium-protoporphyrin O-methyltransferase.
       0.529
CUR34831.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.472
CUR33709.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.465
CUR32705.1
Putative Serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.414
CUR35606.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.414
CUR33708.1
GAF domain protein.
       0.402
Your Current Organism:
Planktothrix tepida
NCBI taxonomy Id: 671072
Other names: Oscillatoria sp. 4d.1, Oscillatoria sp. PCC 9214, P. tepida PCC 9214, Planktothrix sp. PCC 9214, Planktothrix tepida NIES-2870, Planktothrix tepida PCC 9214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.