STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsH-5Cell division protein; Belongs to the AAA ATPase family. (615 aa)    
Predicted Functional Partners:
get
ATPase GET3.
 
 
 
 0.825
rca
Ribulose bisphosphate carboxylase/oxygenase activase.
  
 0.778
gvpW
Gas vesicle protein.
 
     0.726
CUR35168.1
Peptidase C14, caspase catalytic subunit p20.
   
 0.726
CUR36144.1
Peptidase C14 caspase catalytic subunit p20.
   
 0.726
CUR30867.1
Tetratricopeptide repeat protein TPR_2.
    
 0.715
CUR32094.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.715
htpG
Chaperone protein htpG; Molecular chaperone. Has ATPase activity.
    
 0.713
CUR31623.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.701
CUR32047.1
Ankyrin.
    
 0.701
Your Current Organism:
Planktothrix tepida
NCBI taxonomy Id: 671072
Other names: Oscillatoria sp. 4d.1, Oscillatoria sp. PCC 9214, P. tepida PCC 9214, Planktothrix sp. PCC 9214, Planktothrix tepida NIES-2870, Planktothrix tepida PCC 9214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.