STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgiDIRType-2 restriction enzyme HgiDI. (368 aa)    
Predicted Functional Partners:
hindVM
Modification methylase HindV.
 
     0.869
CUR34944.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.768
hgiDIM
Modification methylase HgiDI.
 
     0.579
tuaD
UDP-glucose 6-dehydrogenase TuaD.
       0.481
metK
Methionine adenosyltransferase 1; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.435
CUR30876.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
     0.419
CUR32576.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
  0.416
CUR35869.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
  0.416
CUR35195.1
Competence damage-inducible protein A.
  
     0.407
Your Current Organism:
Planktothrix tepida
NCBI taxonomy Id: 671072
Other names: Oscillatoria sp. 4d.1, Oscillatoria sp. PCC 9214, P. tepida PCC 9214, Planktothrix sp. PCC 9214, Planktothrix tepida NIES-2870, Planktothrix tepida PCC 9214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.