STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_0048Exported protein of unknown function; No homology to any previously reported sequences. (68 aa)    
Predicted Functional Partners:
DAMO_0046
Putative radical SAM domain-containing protein (fragment), 3' end; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
DAMO_0047
Putative radical SAM domain-containing protein (fragment), 5' end; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
DAMO_0044
Putative nucleoside phosphorylase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.642
shc
Squalene--hopene cyclase.
       0.642
DAMO_0043
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.573
DAMO_0041
ABC-type transporter, permease component.
       0.538
DAMO_0042
Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.538
DAMO_0040
Homologs of previously reported genes of unknown function.
       0.515
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.