STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rkpKUDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (440 aa)    
Predicted Functional Partners:
DAMO_2345
Homologs of previously reported genes of unknown function.
 0.979
galU
Glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.962
strD
Glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme).
  
  
 0.954
DAMO_2784
Putative sugar-nucleotide epimerase/dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.951
DAMO_0933
NAD-dependent epimerase/dehydratase.
 
 0.936
galE
UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.934
rfbB
dTDP-D-glucose 4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.921
DAMO_0255
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.917
DAMO_0909
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.866
spsL
Spore coat polysaccharide biosynthesis protein spsL.
  
  
 0.866
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.