STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mxaF-3Methanol dehydrogenase large subunit homolog (mxaF3); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (613 aa)    
Predicted Functional Partners:
mxaI
Methanol dehydrogenase, small subunit (mxaI); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 
 0.966
pmoC2
Particulate methane monooxygenase, c-subunit2 (PMO); Function of strongly homologous gene; enzyme.
     
 0.937
pmoA
Particulate methane monooxygenase, A-subunit (PMO); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.937
mxaF-2
Methanol dehydrogenase large subunit homolog (mxaF2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 
0.908
fae
Formaldehyde activating enzyme (Fae); Function of strongly homologous gene; enzyme.
     
 0.905
pmoB
Particulate methane monooxygenase, B-subunit (PMO); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
mxaG-3
mxaG (cytochrome c1 precursor) involved in methanol dehydrogenase (mxaG3); Function of strongly homologous gene; enzyme.
 
  
 0.878
DAMO_0136
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.875
DAMO_0113
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.781
DAMO_2358
Putative ABC transporter protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   
 0.774
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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