STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_0311Glycosyl transferase, family 2. (250 aa)    
Predicted Functional Partners:
DAMO_0310
Radical SAM domain protein precursor.
 
     0.812
DAMO_1459
Glycosyl transferase family 2.
  
     0.696
ykcC
Uncharacterized glycosyltransferase ykcC.
  
     0.676
DAMO_0303
Glycosyltransferase involved in cell wall biogenesis.
 
     0.626
DAMO_1783
Protein of unknown function; No homology to any previously reported sequences.
 
  
 0.605
DAMO_0255
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.489
DAMO_0614
Dolichol phosphate mannosyltransferase or dolichol phosphate beta glucosyltrandferase.
  
     0.474
DAMO_0309
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.473
DAMO_0197
Putative Similar to glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.412
DAMO_0264
Putative capsular polysaccharide synthesis protein (cpsA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.412
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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