STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhcAFormyltransferase/hydrolase complex subunit alpha (fhcA); Function of strongly homologous gene; enzyme. (548 aa)    
Predicted Functional Partners:
DAMO_0456
Putative formylmethanofuran dehydrogenase, subunit D (FwdD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.999
fhcB
Formyltransferase/hydrolase complex subunit beta (fhcB); Function of strongly homologous gene; enzyme.
 
 0.999
fhcD
Formyltransferase/hydrolase complex subunit epsilon (fhcD); Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
 
 0.998
fhcC
Formyltransferase/hydrolase complex subunit gamma (fhcC); Function of strongly homologous gene; enzyme.
 
 
 0.998
DAMO_1134
Putative formylmethanofuran dehydrogenase, subunit D (FwdD-2); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.996
mch
Methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch); Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
  
 0.955
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of strongly homologous gene; enzyme.
  
 
 0.913
DAMO_0766
FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor.
     
  0.900
fdhA-2
Formate dehydrogenase, alpha subunit (fdhA1); Function of strongly homologous gene; enzyme.
     
  0.900
DAMO_0455
Putative methylene tetrahydromethanopterin dehydrogenase (mtdB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.886
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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