STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_0465Putative Alpha/beta hydrolase fold; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (316 aa)    
Predicted Functional Partners:
DAMO_0466
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.885
DAMO_0467
Putative 2, 3-diketo-5-methylthio-1-phosphopentane phosphatase (phosphoserine phosphatase) (serB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.823
rnb
Putative exoribonuclease II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.603
DAMO_0469
Exported protein of unknown function; No homology to any previously reported sequences.
       0.486
DAMO_1065
Putative Long-chain-fatty-acid--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
      0.458
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.