Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DAMO_0035 | DAMO_1230 | DAMO_0035 | DAMO_1230 | Putative Dehydrogenases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 3-hydroxyacyl-CoA dehydrogenase NAD-binding precursor. | 0.512 |
DAMO_0035 | fixA | DAMO_0035 | DAMO_0646 | Putative Dehydrogenases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Protein fixA; Function of strongly homologous gene; carrier. | 0.761 |
DAMO_0035 | fixB | DAMO_0035 | DAMO_0647 | Putative Dehydrogenases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Protein FixB; Function of strongly homologous gene; carrier. | 0.597 |
DAMO_0700 | DAMO_1230 | DAMO_0700 | DAMO_1230 | Putative Electron transfer oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 3-hydroxyacyl-CoA dehydrogenase NAD-binding precursor. | 0.512 |
DAMO_0700 | fixA | DAMO_0700 | DAMO_0646 | Putative Electron transfer oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Protein fixA; Function of strongly homologous gene; carrier. | 0.761 |
DAMO_0700 | fixB | DAMO_0700 | DAMO_0647 | Putative Electron transfer oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Protein FixB; Function of strongly homologous gene; carrier. | 0.597 |
DAMO_0766 | DAMO_1227 | DAMO_0766 | DAMO_1227 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | Acyl-CoA dehydrogenase. | 0.574 |
DAMO_0766 | DAMO_1230 | DAMO_0766 | DAMO_1230 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | 3-hydroxyacyl-CoA dehydrogenase NAD-binding precursor. | 0.617 |
DAMO_0766 | acdA | DAMO_0766 | DAMO_3029 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | Acyl-CoA dehydrogenase. | 0.574 |
DAMO_0766 | fixA | DAMO_0766 | DAMO_0646 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | Protein fixA; Function of strongly homologous gene; carrier. | 0.956 |
DAMO_0766 | fixB | DAMO_0766 | DAMO_0647 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | Protein FixB; Function of strongly homologous gene; carrier. | 0.746 |
DAMO_0766 | ivd | DAMO_0766 | DAMO_0590 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | isovaleryl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.574 |
DAMO_0766 | ivd-2 | DAMO_0766 | DAMO_0645 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | isovaleryl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.574 |
DAMO_0766 | sucD | DAMO_0766 | DAMO_1442 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | succinyl-CoA synthetase, alpha subunit, NAD(P)-binding; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.498 |
DAMO_1227 | DAMO_0766 | DAMO_1227 | DAMO_0766 | Acyl-CoA dehydrogenase. | FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor. | 0.574 |
DAMO_1227 | DAMO_1230 | DAMO_1227 | DAMO_1230 | Acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase NAD-binding precursor. | 0.997 |
DAMO_1227 | fixA | DAMO_1227 | DAMO_0646 | Acyl-CoA dehydrogenase. | Protein fixA; Function of strongly homologous gene; carrier. | 0.947 |
DAMO_1227 | fixB | DAMO_1227 | DAMO_0647 | Acyl-CoA dehydrogenase. | Protein FixB; Function of strongly homologous gene; carrier. | 0.961 |
DAMO_1230 | DAMO_0035 | DAMO_1230 | DAMO_0035 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding precursor. | Putative Dehydrogenases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.512 |
DAMO_1230 | DAMO_0700 | DAMO_1230 | DAMO_0700 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding precursor. | Putative Electron transfer oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.512 |
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