STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_0744Response regulator receiver protein. (397 aa)    
Predicted Functional Partners:
DAMO_0741
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.994
DAMO_0739
Histidine kinase.
 
 
 0.987
DAMO_1308
Sensor protein (fragment).
 
    0.961
DAMO_1780
Sensor protein (fragment).
  
0.951
DAMO_1151
Response regulator PleD (with diguanylate cyclase and response regulator receiver domains) (fragment).
 
  
 0.940
DAMO_1807
Protein of unknown function; No homology to any previously reported sequences.
   
    0.938
DAMO_2619
Putative Diguanylate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.937
DAMO_0742
Homologs of previously reported genes of unknown function.
  
  
 0.895
DAMO_1266
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.854
DAMO_2593
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.853
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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