STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_0753Homologs of previously reported genes of unknown function. (452 aa)    
Predicted Functional Partners:
DAMO_0752
Putative proteasome A-type and B-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.939
DAMO_0751
Putative proteasome A-type and B-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.900
DAMO_0749
Homologs of previously reported genes of unknown function; Belongs to the AAA ATPase family.
  
 0.888
DAMO_0690
Homologs of previously reported genes of unknown function.
 
  
 0.804
DAMO_1148
Histone deacetylase/AcuC/AphA family protein.
  
    0.553
DAMO_0750
Putative proteasome component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    
0.486
pepA
Putative cytosol aminopeptidase (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase) PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.459
DAMO_1520
Putative Trk system potassium uptake protein trkA (K(+)-uptake protein trkA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.405
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.