STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_0771Homologs of previously reported genes of unknown function. (91 aa)    
Predicted Functional Partners:
DAMO_0772
Homologs of previously reported genes of unknown function.
 
   0.959
DAMO_2515
Homologs of previously reported genes of unknown function.
  
     0.774
DAMO_0773
Putative C4-dicarboxylate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.671
narI
Nitrate reductase, gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.471
narJ
Protein necessary for nitrate reductase assembly (narJ); Function of strongly homologous gene; factor.
       0.471
narH
Nitrate reductase, beta subunit; Function of strongly homologous gene; enzyme.
       0.471
DAMO_0642
Homologs of previously reported genes of unknown function.
 
   0.459
DAMO_0777
Protein of unknown function; No homology to any previously reported sequences.
       0.433
narG
Nitrate reductase, alpha chain; Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.433
DAMO_0779
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.433
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.