STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_0894Protein of unknown function; No homology to any previously reported sequences. (128 aa)    
Predicted Functional Partners:
DAMO_0895
Exported protein of unknown function; No homology to any previously reported sequences.
       0.689
DAMO_0896
Protein of unknown function; No homology to any previously reported sequences.
       0.670
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.670
DAMO_0898
4-hydroxybenzoate polyprenyltransferase-related protein; Belongs to the UbiA prenyltransferase family.
       0.670
DAMO_0893
Protein of unknown function; No homology to any previously reported sequences.
       0.497
DAMO_0892
Peptidase C1A, papain.
       0.494
DAMO_0899
Exported protein of unknown function; No homology to any previously reported sequences.
       0.424
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.