STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1030Homologs of previously reported genes of unknown function. (313 aa)    
Predicted Functional Partners:
DAMO_1031
Putative Sulfite/ferredoxin reductase (cysI); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
       0.632
cysK-2
Pyridoxal-phosphate (PLP) dependent enzymes family; Function of strongly homologous gene; enzyme.
  
    0.581
DAMO_1029
Putative Mov34/MPN/PAD-1 family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.548
pheT
Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.481
DAMO_1032
Exported protein of unknown function; No homology to any previously reported sequences.
       0.474
DAMO_1033
Protein of unknown function; No homology to any previously reported sequences.
       0.474
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.466
DAMO_1025
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.453
DAMO_1024
Putative Molybdopterin biosynthesis protein moeB (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.434
DAMO_1027
Homologs of previously reported genes of unknown function; Belongs to the sulfur carrier protein TusA family.
  
    0.427
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.