STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1045Protein of unknown function; No homology to any previously reported sequences. (51 aa)    
Predicted Functional Partners:
DAMO_1046
ACT domain-containing protein.
       0.762
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.686
DAMO_1043
Exported protein of unknown function; No homology to any previously reported sequences.
       0.600
DAMO_1042
Exported protein of unknown function; No homology to any previously reported sequences.
       0.503
pxpA
Putative lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.482
DAMO_1048
Putative carboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.482
DAMO_1049
Putative urea amidolyase-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.482
DAMO_1041
Exported protein of unknown function; No homology to any previously reported sequences.
       0.448
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.