STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1161Glycine oxidase. (371 aa)    
Predicted Functional Partners:
thiG
Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 0.996
gcvT
Glycine cleavage system T-protein (aminomethyltransferase); The glycine cleavage system catalyzes the degradation of glycine.
 
 
 0.988
DAMO_1162
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.578
sga
Serine-glyoxylate aminotransferase; Function of strongly homologous gene; enzyme.
  
 
 0.543
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.530
icd
Isocitrate dehydrogenase [NADP] (IDH) (Oxalosuccinate decarboxylase) (NADP(+)-specific ICDH) (IDP).
  
 
 0.528
DAMO_1230
3-hydroxyacyl-CoA dehydrogenase NAD-binding precursor.
   
 
 0.525
DAMO_1024
Putative Molybdopterin biosynthesis protein moeB (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.524
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of strongly homologous gene; enzyme.
  
  
 0.512
thiS
Thiamine biosynthesis protein ThiS; Function of strongly homologous gene; factor.
  
  
 0.495
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.