STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1264TonB-dependent receptor, plug. (693 aa)    
Predicted Functional Partners:
DAMO_1265
Putative transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.948
DAMO_1266
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.866
DAMO_1267
Response regulator receiver protein.
       0.773
DAMO_1319
TPR repeat protein precursor.
 
  
 0.663
DAMO_0131
Putative TonB-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
 0.566
DAMO_0449
Homologs of previously reported genes of unknown function.
  
 
 
 0.513
DAMO_1915
Putative Protein tonB2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.486
DAMO_1268
Putative regulatory protein, FmdB family (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.439
DAMO_0223
Exported protein of unknown function; No homology to any previously reported sequences.
    
 
 0.432
DAMO_1946
Homologs of previously reported genes of unknown function.
    
 
 0.432
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.