STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1337Homologs of previously reported genes of unknown function. (410 aa)    
Predicted Functional Partners:
DAMO_1335
Protein of unknown function; No homology to any previously reported sequences.
       0.773
bglIM
Methyltransferase; Modification methylase BglI (M.BglI) (N(4)-cytosine-specific methyltransferase BglI) (BglI modification methyltransferase); Belongs to the N(4)/N(6)-methyltransferase family.
       0.581
DAMO_1338
Homologs of previously reported genes of unknown function.
  
    0.570
DAMO_0840
Homologs of previously reported genes of unknown function.
 
  
0.552
recA
Recombinase A (recA); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
 
   
 0.541
DAMO_1331
Homologs of previously reported genes of unknown function.
       0.504
DAMO_1334
Protein of unknown function; No homology to any previously reported sequences.
       0.504
DAMO_0319
Putative Metallo-beta-lactamase superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.435
dnaK
Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.422
DAMO_2120
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.400
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.