STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1609Protein of unknown function; No homology to any previously reported sequences. (400 aa)    
Predicted Functional Partners:
apgM
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.816
DAMO_2413
Putative heme D1 biosynthesis protein (nirJ) involved in nitrite reductase biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.741
DAMO_0294
Protein of unknown function; No homology to any previously reported sequences.
  
     0.734
DAMO_0920
Protein of unknown function; No homology to any previously reported sequences.
  
     0.713
DAMO_0982
Putative pqq coenzyme synthesis protein (pqqE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.680
DAMO_1611
Molybdenum cofactor biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.595
DAMO_2412
Putative heme D1 biosynthesis protein (nirF), involved in nitrite reductase biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
    0.572
DAMO_0613
Radical SAM domain protein.
  
     0.551
DAMO_0310
Radical SAM domain protein precursor.
  
    0.482
DAMO_2409
Putative transcriptional regulator, AsnC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
  
 0.467
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.