STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1627Protein of unknown function; No homology to any previously reported sequences. (573 aa)    
Predicted Functional Partners:
DAMO_2626
OmpA/MotB precursor.
 
 
 0.574
DAMO_1623
Protein of unknown function; No homology to any previously reported sequences.
       0.572
DAMO_1624
Protein of unknown function; No homology to any previously reported sequences.
       0.572
DAMO_2904
Homologs of previously reported genes of unknown function.
  
 
 
 0.567
DAMO_2417
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.502
DAMO_0158
Putative outermembrane protein (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.492
pal
OmpA/MotB domain protein precursor; Belongs to the Pal lipoprotein family.
  
 
 0.488
pal-2
Exported protein of unknown function; No homology to any previously reported sequences; Belongs to the Pal lipoprotein family.
  
 
 0.488
pal-3
Outer membrane lipoprotein omp16 precursor (peptidoglycan-associated lipoprotein) (modular protein); Belongs to the Pal lipoprotein family.
  
 
 0.488
DAMO_0499
Exported protein of unknown function; No homology to any previously reported sequences.
  
  
 0.440
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.