STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1685Homologs of previously reported genes of unknown function. (304 aa)    
Predicted Functional Partners:
DAMO_1688
Homologs of previously reported genes of unknown function.
 
     0.876
DAMO_1689
Protein of unknown function; No homology to any previously reported sequences.
 
     0.863
DAMO_1687
Homologs of previously reported genes of unknown function.
       0.708
DAMO_1383
Membrane protein of unknown function; No homology to any previously reported sequences.
 
     0.706
DAMO_1686
Putative ATPase of the MinD/MRP superfamily (mrp-like)(ATP/GTP-binding protein); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.648
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of strongly homologous gene; enzyme.
   
    0.539
DAMO_1690
Putative Transcriptional regulator, Crp/Fnr family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.462
DAMO_0773
Putative C4-dicarboxylate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.424
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.