STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliQFlagellar biosynthetic protein fliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)    
Predicted Functional Partners:
DAMO_1737
Putative Flagellar biosynthetic protein fliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
 
 
 0.999
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.999
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
 
 0.998
DAMO_1741
Flagellar motor switch protein FliN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.998
DAMO_1747
Putative Flagellar hook protein flgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.995
fliF
Flagellar basal body M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.995
flgC
Flagellar basal-body rod protein FlgC (cell-proximal rod protein); Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family.
 
 
 0.995
DAMO_1742
Putative Flagellar motor switch protein fliM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.992
DAMO_1759
Putative Flagellar basal-body rod protein flgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.991
fliG
Flagellar motor switch protein fliG; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.990
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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