STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1850Homologs of previously reported genes of unknown function. (120 aa)    
Predicted Functional Partners:
DAMO_1848
Homologs of previously reported genes of unknown function.
       0.773
DAMO_1849
Putative alcohol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
DAMO_1851
Protein of unknown function; No homology to any previously reported sequences.
       0.768
folD
Bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.768
DAMO_1853
Metallo-phosphoesterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.767
DAMO_1847
Protein of unknown function; No homology to any previously reported sequences.
       0.511
DAMO_0797
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.492
DAMO_1660
Putative Cytochrome oxidase assembly precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.466
rny
Conserved protein of unknown function; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
       0.427
DAMO_1669
Hypothetical octaheam cytochrome c; No homology to any previously reported sequences.
  
     0.415
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.