STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1904Putative cation efflux system protein (CzcA/CusA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1027 aa)    
Predicted Functional Partners:
DAMO_1903
Putative Heavy metal efflux pump, CzcB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.952
DAMO_1902
Protein of unknown function; No homology to any previously reported sequences.
 
  
 0.930
DAMO_0962
Efflux transporter, RND family, MFP subunit (fragment); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.867
DAMO_2541
Protein of unknown function; No homology to any previously reported sequences; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.834
DAMO_0961
Outer membrane efflux protein precursor.
  
 0.776
DAMO_1260
Putative Macrolide-specific efflux protein macA precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.662
actP
Copper-transporting P-type ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter.
    
 0.507
DAMO_1901
Protein of unknown function; No homology to any previously reported sequences.
       0.466
DAMO_1932
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.445
DAMO_1905
Exported protein of unknown function; No homology to any previously reported sequences.
       0.415
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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