STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_1957Putative ABC transporter related precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (226 aa)    
Predicted Functional Partners:
DAMO_3153
Homologs of previously reported genes of unknown function.
 
 0.976
DAMO_1956
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   0.966
DAMO_1958
Homologs of previously reported genes of unknown function.
 
     0.932
DAMO_1959
Putative nosL family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.891
DAMO_1960
Homologs of previously reported genes of unknown function.
 
     0.851
DAMO_1955
Homologs of previously reported genes of unknown function.
       0.775
DAMO_0838
ABC transporter related.
 
   
0.682
DAMO_1921
Homologs of previously reported genes of unknown function.
  
 
 0.604
DAMO_0040
Homologs of previously reported genes of unknown function.
  
   0.586
lolC
Lipoprotein releasing system, transmembrane protein, LolC/E family; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   0.583
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.