STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_2003Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (323 aa)    
Predicted Functional Partners:
DAMO_3028
Homologs of previously reported genes of unknown function.
  
 0.986
DAMO_1988
Serine/threonine protein kinase (fragment).
  
 0.831
DAMO_2001
Putative glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.802
DAMO_2002
Putative Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.722
DAMO_2004
Protein of unknown function; No homology to any previously reported sequences.
       0.556
DAMO_1531
Putative Trehalose-phosphatase (Trehalose 6-phosphate phosphatase) (TPP); Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
     0.459
DAMO_2000
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.434
sufS
Highly similar to cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
  
 0.417
DAMO_2005
Protein of unknown function; No homology to any previously reported sequences.
       0.409
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.