STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_2233Homologs of previously reported genes of unknown function. (121 aa)    
Predicted Functional Partners:
DAMO_2232
Protein of unknown function; No homology to any previously reported sequences.
       0.773
DAMO_2225
Homologs of previously reported genes of unknown function.
  
 
   0.733
DAMO_2230
Plasmid stabilization system.
 
  
 0.583
DAMO_2234
Protein of unknown function; No homology to any previously reported sequences.
       0.539
DAMO_0923
Genome sequencing data, contig C328.
  
 
   0.520
DAMO_0973
Homologs of previously reported genes of unknown function.
  
 
   0.511
DAMO_0629
Homologs of previously reported genes of unknown function.
  
 
   0.458
DAMO_2231
Protein of unknown function; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.436
DAMO_2229
Protein of unknown function; No homology to any previously reported sequences.
       0.421
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.