Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DAMO_0395 | nfo | DAMO_0395 | DAMO_2526 | Superoxide dismutase. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.492 |
| DAMO_1157 | nfo | DAMO_1157 | DAMO_2526 | DNA polymerase III, delta prime subunit. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.430 |
| DAMO_1157 | polA | DAMO_1157 | DAMO_2253 | DNA polymerase III, delta prime subunit. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.489 |
| DAMO_1678 | nfo | DAMO_1678 | DAMO_2526 | Homologs of previously reported genes of unknown function. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.504 |
| DAMO_1678 | polA | DAMO_1678 | DAMO_2253 | Homologs of previously reported genes of unknown function. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.578 |
| DAMO_2525 | ftsE | DAMO_2525 | DAMO_2527 | Homologs of previously reported genes of unknown function. | Cell division ABC transpoter (ATP-binding protein); Part of the ABC transporter FtsEX involved in cellular division. | 0.401 |
| DAMO_2525 | nfo | DAMO_2525 | DAMO_2526 | Homologs of previously reported genes of unknown function. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.678 |
| DAMO_2528 | ftsE | DAMO_2528 | DAMO_2527 | Putative Cell division protein FtsX; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Cell division ABC transpoter (ATP-binding protein); Part of the ABC transporter FtsEX involved in cellular division. | 0.997 |
| DAMO_2528 | nfo | DAMO_2528 | DAMO_2526 | Putative Cell division protein FtsX; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.524 |
| DAMO_3042 | nfo | DAMO_3042 | DAMO_2526 | Homologs of previously reported genes of unknown function. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.504 |
| DAMO_3042 | polA | DAMO_3042 | DAMO_2253 | Homologs of previously reported genes of unknown function. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.578 |
| DAMO_3151 | nfo | DAMO_3151 | DAMO_2526 | Putative Endonuclease III; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.504 |
| DAMO_3151 | nth | DAMO_3151 | DAMO_2147 | Putative Endonuclease III; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase); DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.917 |
| DAMO_3151 | polA | DAMO_3151 | DAMO_2253 | Putative Endonuclease III; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.578 |
| ftsE | DAMO_2525 | DAMO_2527 | DAMO_2525 | Cell division ABC transpoter (ATP-binding protein); Part of the ABC transporter FtsEX involved in cellular division. | Homologs of previously reported genes of unknown function. | 0.401 |
| ftsE | DAMO_2528 | DAMO_2527 | DAMO_2528 | Cell division ABC transpoter (ATP-binding protein); Part of the ABC transporter FtsEX involved in cellular division. | Putative Cell division protein FtsX; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.997 |
| ftsE | nfo | DAMO_2527 | DAMO_2526 | Cell division ABC transpoter (ATP-binding protein); Part of the ABC transporter FtsEX involved in cellular division. | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.447 |
| ftsE | polA | DAMO_2527 | DAMO_2253 | Cell division ABC transpoter (ATP-binding protein); Part of the ABC transporter FtsEX involved in cellular division. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.461 |
| nfo | DAMO_0395 | DAMO_2526 | DAMO_0395 | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | Superoxide dismutase. | 0.492 |
| nfo | DAMO_1157 | DAMO_2526 | DAMO_1157 | Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | DNA polymerase III, delta prime subunit. | 0.430 |
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