STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_2630Putative ABC transporter (ATP-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (246 aa)    
Predicted Functional Partners:
yrbE-2
Toluene transporter subunit: membrane component of ABC superfamily; Function of strongly homologous gene; transporter; Belongs to the MlaE permease family.
 0.999
yrbE
Toluene transporter subunit: membrane component of ABC superfamily; Function of strongly homologous gene; transporter; Belongs to the MlaE permease family.
 0.995
DAMO_2631
Putative Mce family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.992
DAMO_2219
Mce-related protein.
 
 0.986
DAMO_2131
Putative ABC transporter (permease proteine); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
      0.907
DAMO_2220
Putative ABC transporter (ATP-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 
0.906
DAMO_2495
ABC transporter, ATPase subunit.
    
0.905
DAMO_3071
ABC transporter, transmembrane region:ABC transporter precursor.
 
    
0.904
DAMO_3153
Homologs of previously reported genes of unknown function.
 
      0.899
modB
Molybdenum ABC transporter (permease protein); Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.867
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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