STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_2686Protein of unknown function; No homology to any previously reported sequences. (104 aa)    
Predicted Functional Partners:
DAMO_2687
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.820
DAMO_2688
Putative G-protein coupled receptor 124 precursor (Tumor endothelial marker 5) (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
dinJ
Antitoxin of YafQ-DinJ toxin-antitoxin system; Function of homologous gene experimentally demonstrated in an other organism; putative factor.
  
 
 0.745
DAMO_2330
N-6 DNA methylase.
   
 
 0.660
rex
Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.631
nuoN
NADH-quinone oxidoreductase chain N (NADH dehydrogenase I, chain N) (NDH-1, chain N); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
       0.610
nuoM
NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.610
nuoL
NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.586
nuoK
NADH-quinone oxidoreductase chain K (NADH dehydrogenase I, chain K) (NDH-1, chain K); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.
       0.452
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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