STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-8PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (135 aa)    
Predicted Functional Partners:
DAMO_2722
Transcriptional regulator, AbrB family (fragment).
       0.774
DAMO_2724
Protein of unknown function; No homology to any previously reported sequences.
       0.773
DAMO_2720
Homologs of previously reported genes of unknown function.
 
     0.673
DAMO_2725
Putative transcriptional regulator, AbrB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.518
DAMO_2726
Death-on-curing family protein.
       0.518
DAMO_0239
Putative DNA polymerase, beta-like region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.498
DAMO_0062
Homologs of previously reported genes of unknown function.
  
     0.488
DAMO_2721
Conserved protein of unknown function; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
    0.488
DAMO_2719
Protein of unknown function; No homology to any previously reported sequences.
       0.476
DAMO_0238
Homologs of previously reported genes of unknown function.
  
     0.469
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.