STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_3000Membrane protein of unknown function; No homology to any previously reported sequences. (512 aa)    
Predicted Functional Partners:
DAMO_2102
Protein of unknown function; No homology to any previously reported sequences.
  
     0.586
xerD
Tyrosine recombinase xerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.580
DAMO_2999
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.580
DAMO_0743
Putative Sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.571
DAMO_1782
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.559
DAMO_3001
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
       0.540
DAMO_0201
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.535
DAMO_0917
Putative Sulfotransferase domain superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.535
DAMO_1067
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.535
DAMO_1319
TPR repeat protein precursor.
  
 
 0.519
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.