STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_3073Putative DAG-kinase catalytic domain (Presumed); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (348 aa)    
Predicted Functional Partners:
DAMO_3075
Homologs of previously reported genes of unknown function.
     0.975
DAMO_3074
Fatty acid desaturase.
 
     0.937
DAMO_3072
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.929
DAMO_3071
ABC transporter, transmembrane region:ABC transporter precursor.
 
     0.857
DAMO_3063
Homologs of previously reported genes of unknown function.
 
     0.825
DAMO_3068
Phosphopantetheine attachment site.
 
   
 0.816
DAMO_3066
AMP-dependent synthetase and ligase.
 
     0.810
DAMO_3076
Homologs of previously reported genes of unknown function.
 
     0.807
DAMO_3067
NAD-dependent epimerase/dehydratase.
 
     0.804
yghO
Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.802
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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