STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAMO_3120Homologs of previously reported genes of unknown function. (96 aa)    
Predicted Functional Partners:
DAMO_3121
Homologs of previously reported genes of unknown function.
       0.775
DAMO_3119
Putative 2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR); Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.620
DAMO_0616
Predicted regulator of plasmid copy number.
  
 
 0.572
DAMO_2024
Helix-turn-helix protein, CopG.
  
 
 0.572
DAMO_3122
Restriction modification system DNA specificity domain:N-6 DNA methylase:Type I restriction-modification system, M subunit (fragment).
       0.570
DAMO_1892
Putative Ribbon-helix-helix protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.501
DAMO_3093
Homologs of previously reported genes of unknown function.
  
     0.494
DAMO_0380
Homologs of previously reported genes of unknown function.
  
     0.468
dinJ
Antitoxin of YafQ-DinJ toxin-antitoxin system; Function of homologous gene experimentally demonstrated in an other organism; putative factor.
   
   0.448
DAMO_1492
Homologs of previously reported genes of unknown function.
  
     0.433
Your Current Organism:
Methylomirabilis oxyfera
NCBI taxonomy Id: 671143
Other names: C. Methylomirabilis oxyfera, Candidatus Methylomirabilis oxyfera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.