STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I4Y719_WALMCUncharacterized protein. (642 aa)    
Predicted Functional Partners:
I4YJ72_WALMC
Uncharacterized protein.
   
 0.990
I4Y6U0_WALMC
COG4-domain-containing protein.
   
 0.987
I4YD56_WALMC
Uncharacterized protein.
   
 0.987
I4YIZ9_WALMC
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.986
I4YCC1_WALMC
Uncharacterized protein.
    
 0.966
I4YHU7_WALMC
t-SNARE coiled-coil homology domain-containing protein.
     
 0.829
I4YIG3_WALMC
V-snare-domain-containing protein.
     
 0.815
I4YE25_WALMC
t-SNARE; Belongs to the syntaxin family.
     
 0.812
I4Y9M8_WALMC
t-SNARE.
     
 0.805
I4YJQ5_WALMC
Vps54 domain-containing protein.
     
 0.803
Your Current Organism:
Wallemia mellicola
NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66
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