STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I4Y9M2_WALMCRibonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (264 aa)    
Predicted Functional Partners:
I4YBC4_WALMC
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.922
I4Y700_WALMC
Thymidylate synthase.
  
 
 0.850
I4Y6M9_WALMC
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.812
I4YF78_WALMC
Nucleic acid-binding protein.
   
 
 0.797
ADI1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
 
    
 0.756
I4YE77_WALMC
ATP-dependent DNA helicase.
  
 
 0.699
I4YIF4_WALMC
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.699
I4Y7Y0_WALMC
Nudix hydrolase domain-containing protein.
    
  0.693
I4YDY6_WALMC
NDK-domain-containing protein; Belongs to the NDK family.
   
 
 0.692
I4YE41_WALMC
Uncharacterized protein.
     
 0.690
Your Current Organism:
Wallemia mellicola
NCBI taxonomy Id: 671144
Other names: W. mellicola CBS 633.66, Wallemia mellicola CBS 633.66
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