STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH44706.1leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (826 aa)    
Predicted Functional Partners:
AOH46421.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.995
AOH46770.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.994
AOH45447.1
isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.989
AOH46759.1
glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.985
BCB70_07815
Oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.984
AOH45127.1
tRNA glutamyl-Q(34) synthetase GluQRS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.968
AOH46812.1
proline--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
AOH46033.1
glutamine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.958
AOH46684.1
lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
valS
valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.946
Your Current Organism:
Propionibacterium
NCBI taxonomy Id: 671223
Other names: P. sp. oral taxon 193, Propionibacterium sp. oral taxon 193
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