STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH44733.1DoxX protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)    
Predicted Functional Partners:
AOH45041.1
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
AOH44734.1
Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.513
AOH44731.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
AOH44732.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
AOH44910.1
Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.445
Your Current Organism:
Propionibacterium
NCBI taxonomy Id: 671223
Other names: P. sp. oral taxon 193, Propionibacterium sp. oral taxon 193
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