STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH46679.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (837 aa)    
Predicted Functional Partners:
AOH45451.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.861
AOH45507.1
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
BCB70_09960
Glycosyl transferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
AOH45672.1
Suppressor of fused protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
AOH45501.1
DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
AOH46827.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
AOH45450.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.727
AOH46555.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
AOH45337.1
RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
AOH46707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
Your Current Organism:
Propionibacterium
NCBI taxonomy Id: 671223
Other names: P. sp. oral taxon 193, Propionibacterium sp. oral taxon 193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.