STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH46111.1Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)    
Predicted Functional Partners:
AOH46112.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.966
AOH46110.1
Ferrisiderophore receptor Irp6A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
AOH45332.1
Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.917
BCB70_06225
Succinate-semialdehyde dehydrogenase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.915
AOH46501.1
Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.906
AOH44640.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.903
AOH44649.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.893
AOH45256.1
Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.888
AOH46523.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.844
AOH45548.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.811
Your Current Organism:
Propionibacterium
NCBI taxonomy Id: 671223
Other names: P. sp. oral taxon 193, Propionibacterium sp. oral taxon 193
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