STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH46192.1Type II 3-dehydroquinate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
AOH44959.1
3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
AOH46599.1
Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.977
AOH46189.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
AOH46190.1
Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
AOH46191.1
Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.796
AOH46779.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.794
AOH44957.1
Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.619
AOH44958.1
Shikimate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.608
AOH46269.1
Trigger factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.583
AOH44668.1
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.555
Your Current Organism:
Propionibacterium
NCBI taxonomy Id: 671223
Other names: P. sp. oral taxon 193, Propionibacterium sp. oral taxon 193
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