STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH46382.1Ribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
AOH46381.1
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.982
AOH46352.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.968
AOH46395.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.959
AOH46089.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.957
AOH44674.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.955
AOH46088.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.955
AOH46312.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.954
AOH46388.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.953
AOH45733.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.951
AOH46027.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.951
Your Current Organism:
Propionibacterium
NCBI taxonomy Id: 671223
Other names: P. sp. oral taxon 193, Propionibacterium sp. oral taxon 193
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