STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0ILA8_SETT2Uncharacterized protein. (307 aa)    
Predicted Functional Partners:
R0IVX5_SETT2
Uncharacterized protein.
    
 0.876
R0KIU0_SETT2
Uncharacterized protein.
   
 0.874
R0IFE6_SETT2
Uncharacterized protein.
     
 0.864
R0K9S1_SETT2
Nop domain-containing protein.
   
    0.847
R0JIS9_SETT2
Uncharacterized protein.
   
    0.843
R0J0N9_SETT2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.827
R0K4D9_SETT2
Formyl_trans_N domain-containing protein.
    
 0.819
R0KM18_SETT2
WD_REPEATS_REGION domain-containing protein.
   
    0.810
R0KTC9_SETT2
Formyl_trans_N domain-containing protein.
   
 
 0.797
R0KPR4_SETT2
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
   
    0.760
Your Current Organism:
Exserohilum turcica
NCBI taxonomy Id: 671987
Other names: E. turcica Et28A, Exserohilum turcica Et28A, Setosphaeria turcica Et28A
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