Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL69475.1 | AIL69476.1 | VV93_v1c03760 | VV93_v1c03770 | Multidrug transporter. | elaA protein. | 0.784 |
AIL69475.1 | AIL69477.1 | VV93_v1c03760 | VV93_v1c03780 | Multidrug transporter. | cAMP-binding protein. | 0.610 |
AIL69475.1 | cpdB | VV93_v1c03760 | VV93_v1c03790 | Multidrug transporter. | Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; Belongs to the 5'-nucleotidase family. | 0.404 |
AIL69476.1 | AIL69475.1 | VV93_v1c03770 | VV93_v1c03760 | elaA protein. | Multidrug transporter. | 0.784 |
AIL69476.1 | AIL69477.1 | VV93_v1c03770 | VV93_v1c03780 | elaA protein. | cAMP-binding protein. | 0.586 |
AIL69476.1 | AIL71714.1 | VV93_v1c03770 | VV93_v1c26380 | elaA protein. | Histone acetyltransferase HPA2. | 0.404 |
AIL69476.1 | cpdB | VV93_v1c03770 | VV93_v1c03790 | elaA protein. | Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; Belongs to the 5'-nucleotidase family. | 0.436 |
AIL69476.1 | ftsH | VV93_v1c03770 | VV93_v1c24310 | elaA protein. | ATP-dependent Zn protease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.430 |
AIL69477.1 | AIL69475.1 | VV93_v1c03780 | VV93_v1c03760 | cAMP-binding protein. | Multidrug transporter. | 0.610 |
AIL69477.1 | AIL69476.1 | VV93_v1c03780 | VV93_v1c03770 | cAMP-binding protein. | elaA protein. | 0.586 |
AIL69477.1 | cpdB | VV93_v1c03780 | VV93_v1c03790 | cAMP-binding protein. | Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; Belongs to the 5'-nucleotidase family. | 0.595 |
AIL71714.1 | AIL69476.1 | VV93_v1c26380 | VV93_v1c03770 | Histone acetyltransferase HPA2. | elaA protein. | 0.404 |
cpdB | AIL69475.1 | VV93_v1c03790 | VV93_v1c03760 | Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; Belongs to the 5'-nucleotidase family. | Multidrug transporter. | 0.404 |
cpdB | AIL69476.1 | VV93_v1c03790 | VV93_v1c03770 | Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; Belongs to the 5'-nucleotidase family. | elaA protein. | 0.436 |
cpdB | AIL69477.1 | VV93_v1c03790 | VV93_v1c03780 | Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; Belongs to the 5'-nucleotidase family. | cAMP-binding protein. | 0.595 |
ftsH | AIL69476.1 | VV93_v1c24310 | VV93_v1c03770 | ATP-dependent Zn protease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | elaA protein. | 0.430 |