Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL69495.1 | AIL69612.1 | VV93_v1c03960 | VV93_v1c05150 | Hypothetical protein. | SH3 domain-containing protein. | 0.538 |
AIL69495.1 | AIL71939.1 | VV93_v1c03960 | VV93_v1c28670 | Hypothetical protein. | Hypothetical protein. | 0.431 |
AIL69612.1 | AIL69495.1 | VV93_v1c05150 | VV93_v1c03960 | SH3 domain-containing protein. | Hypothetical protein. | 0.538 |
AIL69612.1 | AIL69613.1 | VV93_v1c05150 | VV93_v1c05160 | SH3 domain-containing protein. | Pho4 family protein. | 0.520 |
AIL69612.1 | AIL69622.1 | VV93_v1c05150 | VV93_v1c05250 | SH3 domain-containing protein. | Dehydrogenase. | 0.499 |
AIL69612.1 | AIL69943.1 | VV93_v1c05150 | VV93_v1c08490 | SH3 domain-containing protein. | Hypothetical protein. | 0.496 |
AIL69612.1 | AIL70868.1 | VV93_v1c05150 | VV93_v1c17820 | SH3 domain-containing protein. | Hypothetical protein. | 0.476 |
AIL69612.1 | AIL71623.1 | VV93_v1c05150 | VV93_v1c25450 | SH3 domain-containing protein. | Negative regulator of sigma E activity; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic prote [...] | 0.418 |
AIL69612.1 | AIL71939.1 | VV93_v1c05150 | VV93_v1c28670 | SH3 domain-containing protein. | Hypothetical protein. | 0.408 |
AIL69612.1 | hemX | VV93_v1c05150 | VV93_v1c00710 | SH3 domain-containing protein. | uroporphyrin-III C-methyltransferase. | 0.453 |
AIL69612.1 | slmA | VV93_v1c05150 | VV93_v1c02740 | SH3 domain-containing protein. | Nucleoid occlusion protein; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. | 0.437 |
AIL69613.1 | AIL69612.1 | VV93_v1c05160 | VV93_v1c05150 | Pho4 family protein. | SH3 domain-containing protein. | 0.520 |
AIL69622.1 | AIL69612.1 | VV93_v1c05250 | VV93_v1c05150 | Dehydrogenase. | SH3 domain-containing protein. | 0.499 |
AIL69943.1 | AIL69612.1 | VV93_v1c08490 | VV93_v1c05150 | Hypothetical protein. | SH3 domain-containing protein. | 0.496 |
AIL70868.1 | AIL69612.1 | VV93_v1c17820 | VV93_v1c05150 | Hypothetical protein. | SH3 domain-containing protein. | 0.476 |
AIL71623.1 | AIL69612.1 | VV93_v1c25450 | VV93_v1c05150 | Negative regulator of sigma E activity; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic prote [...] | SH3 domain-containing protein. | 0.418 |
AIL71623.1 | AIL71939.1 | VV93_v1c25450 | VV93_v1c28670 | Negative regulator of sigma E activity; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic prote [...] | Hypothetical protein. | 0.674 |
AIL71623.1 | hemX | VV93_v1c25450 | VV93_v1c00710 | Negative regulator of sigma E activity; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic prote [...] | uroporphyrin-III C-methyltransferase. | 0.405 |
AIL71939.1 | AIL69495.1 | VV93_v1c28670 | VV93_v1c03960 | Hypothetical protein. | Hypothetical protein. | 0.431 |
AIL71939.1 | AIL69612.1 | VV93_v1c28670 | VV93_v1c05150 | Hypothetical protein. | SH3 domain-containing protein. | 0.408 |
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