Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL69872.1 | AIL69874.1 | VV93_v1c07760 | VV93_v1c07780 | Pilus assembly protein FimT. | Hypothetical protein. | 0.893 |
AIL69872.1 | AIL69875.1 | VV93_v1c07760 | VV93_v1c07790 | Pilus assembly protein FimT. | Type IV pilin. | 0.976 |
AIL69872.1 | AIL71736.1 | VV93_v1c07760 | VV93_v1c26600 | Pilus assembly protein FimT. | MSHA biogenesis protein MshO. | 0.591 |
AIL69872.1 | pilE | VV93_v1c07760 | VV93_v1c07750 | Pilus assembly protein FimT. | Type IV pilus (Tfp) assembly protein PilE. | 0.937 |
AIL69872.1 | pilN | VV93_v1c07760 | VV93_v1c27220 | Pilus assembly protein FimT. | Type IV pilus (Tfp) assembly protein PilN. | 0.548 |
AIL69872.1 | pilO | VV93_v1c07760 | VV93_v1c27210 | Pilus assembly protein FimT. | Type IV pilus (Tfp) assembly protein PilO. | 0.613 |
AIL69872.1 | pilP | VV93_v1c07760 | VV93_v1c27200 | Pilus assembly protein FimT. | Type IV pilus (Tfp) assembly protein PilP. | 0.472 |
AIL69874.1 | AIL69872.1 | VV93_v1c07780 | VV93_v1c07760 | Hypothetical protein. | Pilus assembly protein FimT. | 0.893 |
AIL69874.1 | AIL69875.1 | VV93_v1c07780 | VV93_v1c07790 | Hypothetical protein. | Type IV pilin. | 0.939 |
AIL69874.1 | AIL71736.1 | VV93_v1c07780 | VV93_v1c26600 | Hypothetical protein. | MSHA biogenesis protein MshO. | 0.746 |
AIL69874.1 | pilE | VV93_v1c07780 | VV93_v1c07750 | Hypothetical protein. | Type IV pilus (Tfp) assembly protein PilE. | 0.864 |
AIL69875.1 | AIL69872.1 | VV93_v1c07790 | VV93_v1c07760 | Type IV pilin. | Pilus assembly protein FimT. | 0.976 |
AIL69875.1 | AIL69874.1 | VV93_v1c07790 | VV93_v1c07780 | Type IV pilin. | Hypothetical protein. | 0.939 |
AIL69875.1 | AIL71736.1 | VV93_v1c07790 | VV93_v1c26600 | Type IV pilin. | MSHA biogenesis protein MshO. | 0.850 |
AIL69875.1 | pilE | VV93_v1c07790 | VV93_v1c07750 | Type IV pilin. | Type IV pilus (Tfp) assembly protein PilE. | 0.921 |
AIL69875.1 | pilO | VV93_v1c07790 | VV93_v1c27210 | Type IV pilin. | Type IV pilus (Tfp) assembly protein PilO. | 0.502 |
AIL71736.1 | AIL69872.1 | VV93_v1c26600 | VV93_v1c07760 | MSHA biogenesis protein MshO. | Pilus assembly protein FimT. | 0.591 |
AIL71736.1 | AIL69874.1 | VV93_v1c26600 | VV93_v1c07780 | MSHA biogenesis protein MshO. | Hypothetical protein. | 0.746 |
AIL71736.1 | AIL69875.1 | VV93_v1c26600 | VV93_v1c07790 | MSHA biogenesis protein MshO. | Type IV pilin. | 0.850 |
AIL71736.1 | pilE | VV93_v1c26600 | VV93_v1c07750 | MSHA biogenesis protein MshO. | Type IV pilus (Tfp) assembly protein PilE. | 0.724 |
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